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Bioinformatic Harvester III - crosslinking 24 gene/protein resources

by Urban Liebel last modified 2007-09-03 17:35
bioinfo-databases
Fig: Bioinformatic Harvester crosslinks, integrates and searches over 24 major gene/protein resources.

The Bioinformatic-Harvester III is a bioinformatic meta search engine for genes and protein associated information.
Harvester currently works for human, mouse, rat, zebrafish and arabidopsis proteins/gens. Harvester cross-links many popular bioinformatic resources and allows cross searches.
A special ranking systems similar to Google pagerank sorts the search results and displays
most relevant information. (see also the Harvester Wikipedia article here).

Harvester searches and crosslinks the following databases:

BLAST, ensEMBL, NCBI Conserved Domains CDART, GeneCards, Genome Browser, gfp-cDNA, gopubmed, Homologene, H-Inv, iHOP, MapView, PSORT II, RZPD, SMART, STRING, SOSUI, Uniprot KB, Source, ZFIN and others...

Try the Bioinformatic Harvester at http://harvester.fzk.de
Find the Harvester Wikipedia article here.

Harvester features:
(+) “Realtime” access to human,mouse, rat and fish protein information and predictions (cached data)
(+) full text search
(+) ranking of search results
(+) displays all information on a single HTML page
(+) displays cross-links to original protein resources
(+) Allows comparison between different predictions programs
(+) Everybody!! can handle the search interface.
(+) Cross links NCBI, EMBL, Source, Uniprot, SMART, COG, GO
(+) Collects plain text entries from
Uniprot/Swissprot, SMART, Source, SOSUI, PSORT II
(+) Cross links BLAST, iHOP, CDART, H-Inv, MapView, STRING, Genome Browser via “iframes”

..the Harvester service is free for everyone.


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