Data integration ("Bioaggregat.org")

Mass data source integration

• project: "Mass Spec data - Harvester interface" (Ulrich Meyer/ Jim Hutchinson)
• project: "human mutation database" (Heiko Runz)
• project: "expression profiling"
• project: "Yeast2hybrid"
  

High content screening (HCS) data generation & integration

• project: "Bioinformatic Harvester III" cross-linking bioinformatic DBs (Urban Liebel)
  

• project: "Genome in a day" (siRNA and small molecule screens)
  

• project: "intelligent" microscopes - Leica Microsystems CAM microscopes

• project: "live zebrafish embryo" HCS screens

• Olympus High content Screening facility at KIT (Karlsruhe Institute of Technology)

High content screening (HCS) data processing

• project: "distributed applications" (LabView, Matlab)

• project: network optimized "low budget cluster" for image processing (Urban Liebel)
  
  

Searching bioinformatic Knowledge ("Bioaggregat.org")

Text based search

• project: "Bionet YaCy", peer 2 peer based distributed search engine (Michael Christen)
• • (Master/diploma thesis open)
    

Sequence based search

• project: custom ASICs for ultra-fast sequence pattern search (Avi Epstein)
  

Image based search

• project: "image fingerprints for large scale image analysis"
• • (Master/diploma thesis open)
    
    

Visualizing bioinformatic knowledge ("Bioaggregat.org")

• project: "Visualpedia" - a wiki-like 3D tool for bioinformatic pathway display
  
• • (Master/Diploma thesis open)